Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915661.1_cds_XP_016465438.1_58392
CDS Infomation

[gene=LOC107788279] [db_xref=GeneID:107788279] [protein=ubiquitin carboxyl-terminal hydrolase 24-like] [protein_id=XP_016465438.1] [location=join(2680..2694,5115..5741,5823..6010,6256..6515,6732..6877,7777..7953,8036..8224)] [gbkey=CDS]
Sequence

ATGAATGATCAAAAGGTGTTGATTTTTGGGTCATTTACGGAAGATGAGATTAAAACTTTG
CAAAGTCAGCCAACAACAACTGATGTAGGGATCATATTTGGTTCGTTGGATTCTGCAACT
TTGAAATCTGTGGGCCTTTTCAACACTAAATTGACCGACCTTGATCATTCTAAGAAACCT
CAGCTACCAGAGCTTGCTCATAAAGAGAATGTCGCCGAGGGTCATAGCAGTATAGGGAAA
ACCATAAAGTCAGCAGGCAAAACTATAAATGAATATGGTAGTTCTAGTTTTACAAATCCT
GATTACAATAGGAGCGTGACAGATTTGAAAACTTTCCGCGAAGAATTACATCCAACAGTG
AACACCGGAAGTACTTATGATTCAGCAGAGAAATCAAGCTTGTCTCAATCGTCTCACAGT
GTGGAAGACGTTAATTTGACTAATCAACTCAAAAACTATAACTTGCTGAATGGTAGACAT
AAATCTTTAAATGGGTCTGTTGTGGTTTTCAGAAGTTTGTTAGCTCGAGGGTTGGTCAAC
TTGGGGAACTTGTGCTTTCTTAATGCAACTCTTCAAGCTCTTCTCTCGTGCTCTCCTTTT
GTTCTTCTCCTGCAAGAACTCAAAACACGCGATATACCACAGGCTGGGTATCCCACTTTA
CATGCCTTTATTCAGTTCATCTCTGAGTTTGGCATATTCAGTGATTCAAGTATGAAGAAA
AAGGAAACAATTTTTCCGGAAATTGGGCAGCCTTTTCGACCTTTAATGTTTGAATCTGTC
CTACAAAACTTTACTCCGGATGTCCCAAATAGCTTGACAGGCAGACCGAGGCAGGAAGAT
GCTCAGGAGTTCCTCAGTTTTCTCATGCATCAGATGCATGATGAATTGCTAAAATTAGAG
GGTCAAGTACCAAATGGTATCGGGAGAAACTCCTCTCTGGTTTCATCAACGGATGACGAG
GAAGAGGATGATGATTGGGAGACTGTTGGCCCAAGGAATAGGACTGCAGTTACTAGAACA
CAGAGCTTTGTCCCGTCAAAATTGAGTGAAATTTTTGGAGGCCAATTGAAGAGTGTAGTG
AAGGCTAAAGGTAACAAAGCCTCAGCAACAGTACAACCATTTCTTCTGCTCCACCTTAAC
ATTTTTCCAGAGCCTATTTGCTCTATAGAAGATGCACTTCGGATGTTTTCTGCACCAGAG
GCACTTGAAGGATATCGAACATCAGCAGCTGGAAAGGCCGAAGTAGTCAGTGCCAGCAAG
TCTGTTAAGATTCTGGAGCTTTCTGATATAATGGTGTTGCATTTAATGCGCTTTAGGTAC
GGAAGTGAAGGGAGCACCAAGTTGCATAAACCCGTGCACTTCCCTTTGGAGCTTGTGTTT
GGACGTGAATTACTTGCCTCTCCCTCTTCTGAGGTTAAGAGGTATGAACTCGTTGCGACA
ATCACTCATCATGGAAGGGACCCTTCAAAGGGTCATTATACGGCCGATGCCCGTCATCAA
AGTGGCAAGTGGCTGCGTTATGATGACGTGTCAGTCACAGTCATCCCGAAAAGCTCGGTG
CTGCATGATCAAGCGTACGTTCTCTTCTACAAACAGTTGTAA

Peptide Sequence

PEP ID

XP_016465438.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Nicotiana tabacum]
Sequence

MNDQKVLIFGSFTEDEIKTLQSQPTTTDVGIIFGSLDSATLKSVGLFNTKLTDLDHSKKP
QLPELAHKENVAEGHSSIGKTIKSAGKTINEYGSSSFTNPDYNRSVTDLKTFREELHPTV
NTGSTYDSAEKSSLSQSSHSVEDVNLTNQLKNYNLLNGRHKSLNGSVVVFRSLLARGLVN
LGNLCFLNATLQALLSCSPFVLLLQELKTRDIPQAGYPTLHAFIQFISEFGIFSDSSMKK
KETIFPEIGQPFRPLMFESVLQNFTPDVPNSLTGRPRQEDAQEFLSFLMHQMHDELLKLE
GQVPNGIGRNSSLVSSTDDEEEDDDWETVGPRNRTAVTRTQSFVPSKLSEIFGGQLKSVV
KAKGNKASATVQPFLLLHLNIFPEPICSIEDALRMFSAPEALEGYRTSAAGKAEVVSASK
SVKILELSDIMVLHLMRFRYGSEGSTKLHKPVHFPLELVFGRELLASPSSEVKRYELVAT
ITHHGRDPSKGHYTADARHQSGKWLRYDDVSVTVIPKSSVLHDQAYVLFYKQL

Transcript Sequence

Gene sequence data has not been registered.